PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021670-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 450aa MW: 49548.9 Da PI: 4.9297

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021670-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.5	8.4e-40	106	166	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s AUR62021670-RA 106 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGTMRNVPVGAGRRKNKSSA 166 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MDPAIKLFGK TIPVIGDDES PRYDSNESSN SDLHDVDDKE STEDAMEIEQ SDDPAPPPEE 60 DSINPPIMSD TNDNEKAPDS EKESEEMDEK ESDDQKSSQQ KTLKKPDKIL PCPRCNSMDT 120 KFCYYNNYNV NQPRHFCKSC QRYWTAGGTM RNVPVGAGRR KNKSSASRYC HITVSEALQA 180 ARLDVPNGVH HPGLKTNGTV LTFGPDNPLC ESMLNIADQK VLNGTTATPR NGFHNMDQAV 240 CRSKENGDDR SSGSTVTTTS SMDEKVTAGQ QGQIKQNLNG FTNQMPCYQW PYMWNPAVPV 300 PPFCPSAFPM SFYPPPPYWN GAMPWNFPWV SPCPPGQKSP GSNPNFPTLG KHSRDGEMLN 360 QSENEKTIGT PTVLVPKTLR IDDPDESAKS SIWSTLGIKK GDSVSKGGGF FNTLQSKKKD 420 DDLHNIDTPP ALQANPAALC RSMNFQESA*

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MDPAIKLFGK TIPVIGDDES PRYDSNESSN SDLHDVDDKE STEDAMEIEQ SDDPAPPPEE  60
DSINPPIMSD TNDNEKAPDS EKESEEMDEK ESDDQKSSQQ KTLKKPDKIL PCPRCNSMDT  120
KFCYYNNYNV NQPRHFCKSC QRYWTAGGTM RNVPVGAGRR KNKSSASRYC HITVSEALQA  180
ARLDVPNGVH HPGLKTNGTV LTFGPDNPLC ESMLNIADQK VLNGTTATPR NGFHNMDQAV  240
CRSKENGDDR SSGSTVTTTS SMDEKVTAGQ QGQIKQNLNG FTNQMPCYQW PYMWNPAVPV  300
PPFCPSAFPM SFYPPPPYWN GAMPWNFPWV SPCPPGQKSP GSNPNFPTLG KHSRDGEMLN  360
QSENEKTIGT PTVLVPKTLR IDDPDESAKS SIWSTLGIKK GDSVSKGGGF FNTLQSKKKD  420
DDLHNIDTPP ALQANPAALC RSMNFQESA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	9e-98	Dof family protein