PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021553-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 389aa MW: 44937.6 Da PI: 8.2581

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021553-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.9	2.4e-15	69	146	17	98
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p+kf+ e+ ++k + tl +s ++W+++l+ ++ + +++GW++Fv++ng++e D++vF+++++s+f v+vf+ AUR62021553-RA 69 KIPRKFM-ECFKVKLLP-WCTLIGPSKNKWKIRLSSTGDETSLKFSDGWEQFVSDNGVEEADSLVFRFVKDSSF--EVTVFD 146 79***.675666665.889*********99999999*************************99999..777776 PP
2	B3	52.8	7.3e-17	269	356	1	87
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+ +++p +v + +l++pk+ a++h++k++ +++l + + sW+v +++ +++s ++ l++ W Fv +n+L+e D++vF+l+++ AUR62021553-RA 269 FQITMLPTHVYRGFNLTIPKNWAKKHMIKEPHEVELHVPGSIKGSWRVGCRWtKGGSIQCQLRSKWPLFVLENNLEEHDTCVFELIQK 356 788999*******************9999999999999999****96666667***********************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEKKCEGCKI AENYKYWFEF PAVKHQFFKV MLGDFKHQLV GKDVLKATVL KLLISAYLIE 60 FFGELFLQKI PRKFMECFKV KLLPWCTLIG PSKNKWKIRL SSTGDETSLK FSDGWEQFVS 120 DNGVEEADSL VFRFVKDSSF EVTVFDMSGC EREGCHFSIN SNSSSRRTSC RSTLHISHGS 180 VAKEEVEICD SSSEDCSLWD EGEEETKDVS HVMEEEREGS SSEGKLPQSQ KYFISNRRDL 240 KPGEKKRASK MAECYRRSMK DNKRVFPVFQ ITMLPTHVYR GFNLTIPKNW AKKHMIKEPH 300 EVELHVPGSI KGSWRVGCRW TKGGSIQCQL RSKWPLFVLE NNLEEHDTCV FELIQKGKLD 360 NVRTPIFNVH IFRTFDHIVP LTVSTHMV*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEKKCEGCKI AENYKYWFEF PAVKHQFFKV MLGDFKHQLV GKDVLKATVL KLLISAYLIE  60
FFGELFLQKI PRKFMECFKV KLLPWCTLIG PSKNKWKIRL SSTGDETSLK FSDGWEQFVS  120
DNGVEEADSL VFRFVKDSSF EVTVFDMSGC EREGCHFSIN SNSSSRRTSC RSTLHISHGS  180
VAKEEVEICD SSSEDCSLWD EGEEETKDVS HVMEEEREGS SSEGKLPQSQ KYFISNRRDL  240
KPGEKKRASK MAECYRRSMK DNKRVFPVFQ ITMLPTHVYR GFNLTIPKNW AKKHMIKEPH  300
EVELHVPGSI KGSWRVGCRW TKGGSIQCQL RSKWPLFVLE NNLEEHDTCV FELIQKGKLD  360
NVRTPIFNVH IFRTFDHIVP LTVSTHMV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	1e-20	B3 family protein