PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021507-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 320aa    MW: 36748.3 Da    PI: 6.2912
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021507-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.37.7e-36141062103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y++++d+++++lisw + +nsf+v+++ ef++++Lp++Fkh+nf+SFvRQLn+YgF+kv+ ++         weF++++F +g+k+ll++
  AUR62021507-RA  14 FVMKTYQMVSDPSTDHLISWGRANNSFIVVEPLEFSQRILPSFFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEWFLRGQKQLLRN 99 
                     9********************999*****************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i rkk++
  AUR62021507-RA 100 IARKKHT 106
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MVKMEQNGNM IAPFVMKTYQ MVSDPSTDHL ISWGRANNSF IVVEPLEFSQ RILPSFFKHN  60
NFSSFVRQLN TYGFRKVDPD RWEFANEWFL RGQKQLLRNI ARKKHTNRPH PHLQDADDHE  120
LLVEIERLRE EQKTLDDELK GMNRRLEGTE RRPQQMMAFL CKVVEDPEIL PRVMMERDLA  180
KHLCSGGGDE GAASPEKRRR LLMMLSSTSS SGMAHSYSEE DEGTNGGAIS SSHINFDPHS  240
PSSPNTCNSP MYSNRLQYSK GQYNCISVSS EPLPSDLVPN YDYFQRDLEN SIYLGHNPNY  300
MPLKEENPSY PFSLLDGSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197201KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.12e-77HSF family protein