PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021459-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 277aa    MW: 30305.7 Da    PI: 7.325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021459-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000281411801155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  AUR62021459-RA 141 VRKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 180
                     56778889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MMAAGNPSWW PNINNLMRPP ILSHQPLLSS PSSFISPPLN NSNNNDEDNT NNVFQAQYNN  60
TMNSSSSWLG DHPTNNNNNH HEHQLPESWS QLLFDNLHSR HPPPPPAPDR STECNSNASG  120
GAAAKKAKVQ PSTTPSTAFK VRKEKLGDRI TALHQLVSPF GKTDTASVLL EAIGYIRFLQ  180
SQIEALSLPY LNTGAGNKMQ PHPIQGERKC IFPEDPGQLL NDNSLKRKGG PDQDSYEEAK  240
DLRSRGLCLV PVSCTLHVGS ENRADYWAPA LGGGFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-66bHLH family protein