PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021227-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 1440aa MW: 155252 Da PI: 5.1571

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021227-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.2	4.3e-24	184	237	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l+Wtp LH+rF++a++ + G ++A+Pk+i+e+m+v gL+++h+ SHLQkYR+ AUR62021227-RA 184 KPKLVWTPALHNRFLDAMKAI-GYDRAVPKKIMEHMNVIGLSRQHISSHLQKYRI 237 79*****************.******************************7 PP
2	Myb_DNA-binding	32.2	2.4e-10	186	236	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT+ ++ +++da k G + +k+I+++m+ g+++ ++ s++qky+ AUR62021227-RA 186 KLVWTPALHNRFLDAMKAIGYDraVPKKIMEHMNvIGLSRQHISSHLQKYR 236 679***********************************************7 PP
3	Response_reg	42.9	2.7e-15	23	119	1	95
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT.HHHHHHHH.H CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge.eedaleal.k 91 vl+vdD+ + ++ ++++l+ +y +v+ a+d+ eal++l+ k +D +l Di mp m G+ l ++i+ ++p+++++ ++ +++a+e + AUR62021227-RA 23 VLVVDDDSSCLDFFTRLLNMLNY-QVTPARDPFEALNILQMKVvsFDFVLADIYMPLMYGVVLQQKIEDDF-SIPVVLMSEVSDkQQLAVETGlQ 115 89*******************.***********999999******************9998.9*****666636666554326 PP TTES CS Response_reg 92 aGak 95 Ga+ AUR62021227-RA 116 EGAM 119 6665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1440 aa Download sequence
MNEDYENPFN RSPIDESVPE VKVLVVDDDS SCLDFFTRLL NMLNYQVTPA RDPFEALNIL 60 QMKVVSFDFV LADIYMPLMY GVVLQQKIED DFSIPVVLMS EVSDKQQLAV ETGLQEGAMV 120 MSKPPTVDQV QNLWRYILTR LKAKNNFKGK KPIKGKSDEI ELSELNGNNE NEDPSKIDSR 180 KRPKPKLVWT PALHNRFLDA MKAIGYDRAV PKKIMEHMNV IGLSRQHISS HLQKYRIYMK 240 KIYDACMKIE EYGVPFDWMQ MMSSLSWEEF PDLVHNSYLL NYATAVFMKE IEEDKNRTTF 300 KRRRTFTQFG LNNAMPMLGN GTNTSGNGIG LSPSLAPPSS QGLGSLYTPY RPIASRVTPI 360 SSNGNIGATS GVGSLYTPYR PLVPITPIPS NGTLSTISAT SGVGSLYTPY RPLAPVTPIP 420 SNGTTSTIGA TSGVGSLYTP YRPLAPVTPI PSNGTTSTTG ATSGVGSLHT LYRPIASRVT 480 PTLSNDTIGA TSGVGSLHTP YWPIASRVTP ILSNDTSGVG SLYTPYQPIA SRVTPTLSND 540 TIGATSGVGS LYTPYRPIAS RVTPTLSNDT FGATSGVGSL YTPYRPIASR VTPTLSNGTI 600 GATSGVGSLY TPYRPISPLV TPIPSKGTIG ATSGVGTLYT PYQPISPHVT PISSSGNIGA 660 TSGVDSLYTP YRPISPLVTP ITSNGAIGAT NGANYYHDII GNRTRKNNVP WRVLESTVPN 720 VGGYINNNGT GTQPQTVMTQ WPFGYAGLHG GGPSNGMAVD NNGHFPGGIQ NFTNGNYMMQ 780 QPSIGNMASN IVGQPYGVAT SQVNYMPTYM NQHLGTNSMP DTTPVPAAMP SHVASSSSDP 840 TTTRLSNFGS RPNFTLPNSF VSPMGEFFNL SQQPFSQIAA MINLTKGATT PLGAVWNHAA 900 QSSSDEANNG PLPLAKLSDF VKQPDPATDV VDISDDSEKA PSDVNVLNSV DEQPQPTVAA 960 ATSNMTKSVA QQPQVVSGNS DNLSNTSAGN QNVVTFTEQL AVGNQESNGS SVSNDQQAQE 1020 MEGYGFNNGT SNHLQNWLSN VYNDEYSMDP MDAIAAYLNN DLVDADNDPL LEVLVNGRRG 1080 NAMIDTGATH NFISQGEARR LGLKPIQEGG SMKVVNSAAN PVHGVARNIP TKLGDWSGNL 1140 DFTVATMDDF NLVLGMDFLR ASKAVPMPHL GSVLVAGQQP CLLKTCKMRK GSKGPLLSAM 1200 QLKRGLKRNE PTFLATLSVK EDVAPHEIPA VLDKLLTEFE DLLPKELPKR NYQTAMGSQP 1260 WEEHHVLPEL KENLEELFPG LTIEEALQHQ ESLYQSLKIS CLTIDQIARS SDNEPSSSHE 1320 HSWGESSFSG SCDYDLALDE AVARSLQELD LEEEIDHDAI SESLRSASRN SEPAAAAGTS 1380 VSETIQDSVD PDEMTYEELQ SLGEAIGSEN QGLSKSEISS LPRHTHKSGI FSKKIDIGE*

Sequence ? help Back to Top

Protein Sequence Length: 1440 aa Download sequence

MNEDYENPFN RSPIDESVPE VKVLVVDDDS SCLDFFTRLL NMLNYQVTPA RDPFEALNIL  60
QMKVVSFDFV LADIYMPLMY GVVLQQKIED DFSIPVVLMS EVSDKQQLAV ETGLQEGAMV  120
MSKPPTVDQV QNLWRYILTR LKAKNNFKGK KPIKGKSDEI ELSELNGNNE NEDPSKIDSR  180
KRPKPKLVWT PALHNRFLDA MKAIGYDRAV PKKIMEHMNV IGLSRQHISS HLQKYRIYMK  240
KIYDACMKIE EYGVPFDWMQ MMSSLSWEEF PDLVHNSYLL NYATAVFMKE IEEDKNRTTF  300
KRRRTFTQFG LNNAMPMLGN GTNTSGNGIG LSPSLAPPSS QGLGSLYTPY RPIASRVTPI  360
SSNGNIGATS GVGSLYTPYR PLVPITPIPS NGTLSTISAT SGVGSLYTPY RPLAPVTPIP  420
SNGTTSTIGA TSGVGSLYTP YRPLAPVTPI PSNGTTSTTG ATSGVGSLHT LYRPIASRVT  480
PTLSNDTIGA TSGVGSLHTP YWPIASRVTP ILSNDTSGVG SLYTPYQPIA SRVTPTLSND  540
TIGATSGVGS LYTPYRPIAS RVTPTLSNDT FGATSGVGSL YTPYRPIASR VTPTLSNGTI  600
GATSGVGSLY TPYRPISPLV TPIPSKGTIG ATSGVGTLYT PYQPISPHVT PISSSGNIGA  660
TSGVDSLYTP YRPISPLVTP ITSNGAIGAT NGANYYHDII GNRTRKNNVP WRVLESTVPN  720
VGGYINNNGT GTQPQTVMTQ WPFGYAGLHG GGPSNGMAVD NNGHFPGGIQ NFTNGNYMMQ  780
QPSIGNMASN IVGQPYGVAT SQVNYMPTYM NQHLGTNSMP DTTPVPAAMP SHVASSSSDP  840
TTTRLSNFGS RPNFTLPNSF VSPMGEFFNL SQQPFSQIAA MINLTKGATT PLGAVWNHAA  900
QSSSDEANNG PLPLAKLSDF VKQPDPATDV VDISDDSEKA PSDVNVLNSV DEQPQPTVAA  960
ATSNMTKSVA QQPQVVSGNS DNLSNTSAGN QNVVTFTEQL AVGNQESNGS SVSNDQQAQE  1020
MEGYGFNNGT SNHLQNWLSN VYNDEYSMDP MDAIAAYLNN DLVDADNDPL LEVLVNGRRG  1080
NAMIDTGATH NFISQGEARR LGLKPIQEGG SMKVVNSAAN PVHGVARNIP TKLGDWSGNL  1140
DFTVATMDDF NLVLGMDFLR ASKAVPMPHL GSVLVAGQQP CLLKTCKMRK GSKGPLLSAM  1200
QLKRGLKRNE PTFLATLSVK EDVAPHEIPA VLDKLLTEFE DLLPKELPKR NYQTAMGSQP  1260
WEEHHVLPEL KENLEELFPG LTIEEALQHQ ESLYQSLKIS CLTIDQIARS SDNEPSSSHE  1320
HSWGESSFSG SCDYDLALDE AVARSLQELD LEEEIDHDAI SESLRSASRN SEPAAAAGTS  1380
VSETIQDSVD PDEMTYEELQ SLGEAIGSEN QGLSKSEISS LPRHTHKSGI FSKKIDIGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	9e-29	ARR-B family protein