PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021129-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-X1

Protein Properties

Length: 585aa MW: 63615.9 Da PI: 8.2998

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021129-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	18.6	4.2e-06	164	181	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C ++CH+GpC++C AUR62021129-RA 164 CGNHVCAEICHPGPCGEC 181 ****************** PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MVRRNAPVWS CSSCYSIFHL NCIKKWARAP TSADTSAEKI QGYNWRCPGC QACHPGPCPP 60 CKDFAPPRLC LCGKKVITTR CSERKSVYTC GEVGNKILEC GRHHCDQICH VGPCEPCQVP 120 IDSSCFCKKK SEVVICGELS LKGEIRPDDG LYSCSSTCGK KLKCGNHVCA EICHPGPCGE 180 CEFLPSKVKT CYCGKKNLRV RRRSCLDPIP TCLGTCGKLL PCNKHYCKDK CHVGNCSPCS 240 TQKCRCGSTS RTVECYKTTL ASEKFVCDWQ CGRKKNCGRH RCSERCCPLS DSRNTVSGNW 300 IPHFCSMPCG KKLKCGQNSC EAFCHCGHCP PCMETIFTDL TCACGRTSIP PPLPCGTPPP 360 SCQYPYSVPQ PCGHQSTHSC HFGNCPPCSV PIAKECVGGH VVLRNIPCGS KDITCIKLCG 420 KTKRCGLHSC SRSCHPAPCD PSCGPSDPVV KGSYGKVCGA PRRDCRHTCQ AFCHPTTPCP 480 ESRCEFPVTI TCSCGRITAT VPYDAGGSNL GFSAVNRKLM CDDECAKLVR KRVLADAFDI 540 SQPSLDALHF GENAAVSQVV SELLRRDPKW VLAVEERCKH LVLG*

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MVRRNAPVWS CSSCYSIFHL NCIKKWARAP TSADTSAEKI QGYNWRCPGC QACHPGPCPP  60
CKDFAPPRLC LCGKKVITTR CSERKSVYTC GEVGNKILEC GRHHCDQICH VGPCEPCQVP  120
IDSSCFCKKK SEVVICGELS LKGEIRPDDG LYSCSSTCGK KLKCGNHVCA EICHPGPCGE  180
CEFLPSKVKT CYCGKKNLRV RRRSCLDPIP TCLGTCGKLL PCNKHYCKDK CHVGNCSPCS  240
TQKCRCGSTS RTVECYKTTL ASEKFVCDWQ CGRKKNCGRH RCSERCCPLS DSRNTVSGNW  300
IPHFCSMPCG KKLKCGQNSC EAFCHCGHCP PCMETIFTDL TCACGRTSIP PPLPCGTPPP  360
SCQYPYSVPQ PCGHQSTHSC HFGNCPPCSV PIAKECVGGH VVLRNIPCGS KDITCIKLCG  420
KTKRCGLHSC SRSCHPAPCD PSCGPSDPVV KGSYGKVCGA PRRDCRHTCQ AFCHPTTPCP  480
ESRCEFPVTI TCSCGRITAT VPYDAGGSNL GFSAVNRKLM CDDECAKLVR KRVLADAFDI  540
SQPSLDALHF GENAAVSQVV SELLRRDPKW VLAVEERCKH LVLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein