PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020662-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 160aa    MW: 17572.9 Da    PI: 4.3137
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020662-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB76.63.6e-241296387
           NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87
                    ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +v+se++d c+re+++ti+++ +l al  lGf +y+e + +  
  AUR62020662-RA 12 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREEKRTIAPEHVLKALEVLGFGEYIEDVYAAY 96
                    6899***************************************************************************986544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MMEPMDIVGK AKEDASLPKA TMTKIIKEML PPDVRVARDA QDLLIECCVE FINLVSSESN  60
DVCNREEKRT IAPEHVLKAL EVLGFGEYIE DVYAAYEQHK VETMQDGVRG GGGGKWGNAA  120
EMTEEEAAAE QQRMFAEARA RMNGNVPLPK SDTEPTPES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.27e-71NF-YB family protein