PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62020516-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 92aa MW: 10481.3 Da PI: 9.7493 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.9 | 1.4e-11 | 31 | 80 | 37 | 87 |
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 ++ ++ +sW++++i++ ++ l k Wk+F+ +n+Lk+gD+++F+l+++ AUR62020516-RA 31 VILTRGTESWTMNYIVNDIVNK-RLDKRWKQFAVDNKLKVGDVCTFELMSK 80 44567789******88444333.49**********************9864 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MSILLRRMFL LYQLTIPAEG VRLLPNIEAP VILTRGTESW TMNYIVNDIV NKRLDKRWKQ 60 FAVDNKLKVG DVCTFELMSK VPEVEGSSPS R* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 52 | 59 | KRLDKRWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18000.1 | 3e-07 | B3 family protein |