PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020515-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 275aa    MW: 30941.4 Da    PI: 5.2584
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020515-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.5e-131712481596
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +++lp +f ++  +k + +   ++ ++ g+sWe ++  ++ ++   + + W+ F+++n+L++gD++vF+l+++s++ l++kv
  AUR62020515-RA 171 QVILPIQFSQALPNK-TIP---VILTRGGNSWETTYFGENAPSYKRFDSRWRVFAEDNNLEVGDVCVFELMEQSDTLLKFKV 248
                     578888888666433.343...4566899*******8899999999***********************9977666555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
ILFELIAKGG TVKGLIKEKN LVQITNPAEI EQMIDKVLAE NPKQVEQYRG GKTKLQGFFA  60
GQTMGDKIQE QVKTMIEAQD NCLAAVEAKI TDVSELLVGR TRGRRRRPDL FALRWGTKQV  120
YEDTTTPLYN EKSTSTDDSC QDVDIEPLSG KPYFPIVIVK SHIGLVAYKY QVILPIQFSQ  180
ALPNKTIPVI LTRGGNSWET TYFGENAPSY KRFDSRWRVF AEDNNLEVGD VCVFELMEQS  240
DTLLKFKVQV LRGDFPSMLL NKEDGTINNP IVVE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.18e-07B3 family protein