PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62020288-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 254aa MW: 27762.1 Da PI: 10.196 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.9 | 7.9e-32 | 161 | 219 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+++dp+++++tYegeH+h+ AUR62020288-RA 161 SDDYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPTMLIVTYEGEHRHS 219 69************************9888****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
PPVCQLQQQQ PEKPIPLRAI RHHPVTLDFS KPNPNPNPKQ CGSVSKSASF SISSSANSSS 60 FLSSITGEET VSNGKQFGSG ARSMFVPPSS SGKPPLSTSS SSHHNKSCNH HRHQHNEFSD 120 DISGKACGST RCHCSSKRKK LRVKKTMRVP AISAKTADIP SDDYSWRKYG QKPIKGSPYP 180 RGYYKCSTVR GCPARKHVER ATDDPTMLIV TYEGEHRHSP APATQDHNLQ VVPTTAAPAW 240 FQPHHHPILT LSD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31550.2 | 1e-53 | WRKY family protein |