PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62020118-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | C3H | ||||||||
Protein Properties | Length: 227aa MW: 25994.2 Da PI: 8.7437 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 29.9 | 9.8e-10 | 85 | 105 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 Cr f++ G C yGd+CkF+H+ AUR62020118-RA 85 VCRAFQK-GDCTYGDSCKFSHD 105 6******.*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MNPLTLVKRI QSINAKEADL GISDEASWHA KYKDSAYVFV GGIPYDLTEG DLLARAADTG 60 WGHEEDKKSK WENDKSSYPR RERGVCRAFQ KGDCTYGDSC KFSHDEQRAA DTGWGPEEDK 120 KSKWVNDNRS NDNKRSRDAP PSHGPERKKP DIYGGRSSGG KEIADKKVED GFDTRDGGKR 180 SEYKDDRDKR PLERSRDSSP QRHRDRDDGD QRRARRDEDY HRSQRK* |