PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62019980-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19293.2 Da PI: 4.2813 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.7 | 1.6e-14 | 2 | 45 | 10 | 56 |
AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++g+Wv+eIr+p++ + r++lg+f ta++Aa+a++ a+++++g+ AUR62019980-RA 2 RNWGKWVSEIREPRK---KSRIWLGTFATADMAARAHDVAALAIKGH 45 57**********843...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MRNWGKWVSE IREPRKKSRI WLGTFATADM AARAHDVAAL AIKGHNAYLN FPELANQLPK 60 PSSTAPKDIQ AAAIKAALDF PDSSQAEPSA QADSPDTTIT STSSNYDTSS SASSANYDYN 120 FDDTIFFNLP DLFLDLENVI KFEDSLHWQL PEADEPTAHI EDHQPGDLFL WDY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 1e-28 | ERF family protein |