PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019829-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 344aa    MW: 37849.8 Da    PI: 7.444
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019829-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-18120170256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg++ tae Aa a+++a+ kl+ge
  AUR62019829-RA 120 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYETAETAAYAYDRAAYKLRGE 170
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEENNYQSSS TSFTTPTDIR DSVSALILTA GANNTNTLDS IFSYFPNSNP NPTNNNNNSM  60
IEPLGSSVYL KQRDLLQQFW LDNRSNKTGI HASSSLNNQL FQSNSSSFSS HMNNPGKKKL  120
YRGVRQRHWG KWVAEIRLPQ NRMRVWLGTY ETAETAAYAY DRAAYKLRGE YARLNFPNLK  180
DGTKLGFGDA ARMNAVKSAV DTKIQTICQK LKKERANRIA KKKQKEASIS DSGSGGGSGG  240
RDENSIVSHS GDSNTLNEND SLVVKDTYSS SSSSFCSTVV NDSGMVSPAI SEEGWWSNGN  300
GASPCSDSMT SYPMMTDDFG FNDCSLEKMP SFDPELIWEV LAI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-55ERF family protein