PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019798-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 276aa    MW: 30957.2 Da    PI: 7.7402
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019798-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-19126176155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  AUR62019798-RA 126 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 176
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MESSSKILHP VKYTEHKNHT TLHKKPRNKF HHHSVFPKIV RISVTDGDAT DSSSDEDYSD  60
DSRRRRIKRF VNEVNIEXXX XXXXXXEAAV AVPANGVVSR RPKKRGKCSS SVKQSNTLNV  120
NANGGKKFRG VRQRPWGKWA AEIRDPLRRV RLWLGTYDTA EEAAMVYDNA AIQLRGPHAL  180
TNFSTPNSDK LKETHKKLSL STTSSSIDDE GDDGSHHRPS VYSPTSVLRF QPEPEPVSPK  240
EEDVVVGCSV MASVEGNLEK IIDLNEVFED CEEED*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
165107RRIKRFVNEVNIEXXXXXXXXXEAAVAVPANGVVSRRPKKRGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-46ERF family protein