PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019504-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 416aa    MW: 45544.9 Da    PI: 6.6506
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019504-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.85.6e-0655753656
                    HCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 36 klgLterqVkvWFqNrRakek 56
                    k+ ++ +qV +WFqNrR+  +
  AUR62019504-RA 55 KITVQMKQVWNWFQNRRYALR 75
                    458999***********9655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MGRPPTHGAP SFRFFPAEVA QMEALLREHG GHVPAREVLM ALADRFSNSS ERSGKITVQM  60
KQVWNWFQNR RYALRSKLVK APGNPNMPPN PQAEVTPVRN VPSVPQQTIA PSPSGHNVAK  120
NTTENPLMEF EAKSARDGAW YDVQAFHSHR YLETGNPEVL IRFSGFGPEE DEWVNVRKHV  180
RQRSLPCESS ECVAVLPGDL ILCFQEGKEQ ALYFDAHVLD AQRRRHDVRG CRCRFLVRYD  240
HDQSEEIVPL RKVCRRPETD YRLQVLHAAN ESASASVSAD SKKAVVDPAS SSSLRVTSHN  300
PSAFTKSGNL RTSATEAFAE NIINPGAASE IVEVKKEEGQ NLESSMFAGS NISQGETSDN  360
PSITIPGSEK PGVIEPIEQA MAVSTATTGS SPIVSSLSTK AESSNQAVSA EDTKE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.11e-121HB-other family protein