PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62019452-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | SBP | ||||||||
Protein Properties | Length: 203aa MW: 22122.7 Da PI: 10.3383 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135 | 2.4e-42 | 77 | 154 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C++dl+eak+yhrrhkvCe+h+kap+vlvsgl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ AUR62019452-RA 77 RCQAEKCTVDLTEAKRYHRRHKVCEHHAKAPSVLVSGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKSAS 154 6**************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MMVVVQSNPL FKIAVGREER GKVVGEIWGC RVAGGGNEEP SLVLGRSDKR WQLRGGGKGG 60 DGGDGGGSGG LLLGLARCQA EKCTVDLTEA KRYHRRHKVC EHHAKAPSVL VSGLRQRFCQ 120 QCSRFHELSE FDETKRSCRR RLAGHNERRR KSASESQGEG GSTSSQSKGS NLQLRTGDQA 180 QLSYSGNNNN NCTSSYKQFQ IR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33810.1 | 8e-39 | SBP family protein |