PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019144-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 334aa    MW: 37424.4 Da    PI: 9.6712
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019144-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind380.13.7e-11613331301
       GAGA_bind   1 mdddgsre..rnkg.yyepa...aslkenlg.lqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd+g+re  r+k+ +y+p      +++ ++ +++ms++aerda+i+ern+a+ ek++a+ erdma +qrd+a++ern+a++erdn+l++l++++
  AUR62019144-RA   1 MDDSGHREngRHKPeMYKPPhsqWLMQQPQSmKHIMSIMAERDAAIQERNMAINEKNKALEERDMAIMQRDTAMQERNEAFMERDNALATLQFRQ 95 
                     9*****999*****99995544333444444157************************************************************* PP

       GAGA_bind  89 nsla..salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 179
                     ns++  +++p+++q+++g+k++++ qq +++ p++++ +++ re +  +alp+++ a+e+ + +k+k      ++ke++a +++kk++ks +k k
  AUR62019144-RA  96 NSMNgsNSCPPSCQISRGVKHMHHPQQhIQHpPHVGEASYDGREIQVPDALPLTSVAPESAKPRKVK------RTKEPNAASPNKKTSKSGRKGK 184
                     **99999*******************9645579*************999999999888888877776......5555666666666666666677 PP

       GAGA_bind 180 kesader...........................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvs 247
                     +e++d +                            k+++k  dl+ln+v++Des++P+PvCsCtG+ rqCYkWGnGGWqS+CCttt+SvyPLP++
  AUR62019144-RA 185 REGEDLNkimfskpqewkgmpdmdgddgfkqlggPKSDWKGPDLGLNQVAFDESNMPPPVCSCTGVYRQCYKWGNGGWQSSCCTTTMSVYPLPAV 279
                     776663346777778899***************************************************************************** PP

       GAGA_bind 248 tkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     +++r+aR++grKmS++af+klL++Laa+G+dls+pvDLkdhWAkHGtn+++tir
  AUR62019144-RA 280 PNKRHARVGGRKMSGSAFSKLLSRLAADGHDLSTPVDLKDHWAKHGTNRYITIR 333
                     *****************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDDSGHRENG RHKPEMYKPP HSQWLMQQPQ SMKHIMSIMA ERDAAIQERN MAINEKNKAL  60
EERDMAIMQR DTAMQERNEA FMERDNALAT LQFRQNSMNG SNSCPPSCQI SRGVKHMHHP  120
QQHIQHPPHV GEASYDGREI QVPDALPLTS VAPESAKPRK VKRTKEPNAA SPNKKTSKSG  180
RKGKREGEDL NKIMFSKPQE WKGMPDMDGD DGFKQLGGPK SDWKGPDLGL NQVAFDESNM  240
PPPVCSCTGV YRQCYKWGNG GWQSSCCTTT MSVYPLPAVP NKRHARVGGR KMSGSAFSKL  300
LSRLAADGHD LSTPVDLKDH WAKHGTNRYI TIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-132BBR-BPC family protein