PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018873-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 131aa    MW: 14606.7 Da    PI: 8.903
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018873-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.34.3e-09952453
             AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
                    +GV    ++g+W A   +     +rkrf+lg++  + +Aa a+++a +kl
  AUR62018873-RA  9 RGVV-PTYTGKWGALTSV-----RRKRFWLGTYEKEIDAAVAYDRACLKL 52
                    6773.6679999999555.....25**********99*********9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MEGELKRLRG VVPTYTGKWG ALTSVRRKRF WLGTYEKEID AAVAYDRACL KLCRHKLLNF  60
SFDTNECEFQ SNYSFETIVS MIKDGTYPEN YAQFLAKRQN LGGGVGSGET GSACIPKPHE  120
PVMVFGVRIG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50680.13e-17RAV family protein