PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018674-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 488aa    MW: 54457.6 Da    PI: 4.5543
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018674-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.81.1e-35101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y++++d+++++++sws++ nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll++
  AUR62018674-RA  10 FLCKTYDMVDDSATDSVVSWSSTHNSFIVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKN 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k 
  AUR62018674-RA  96 ITRRKP 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MSNVNGPPPF LCKTYDMVDD SATDSVVSWS STHNSFIVWN PPEFARDLLP KYFKHNNFSS  60
FVRQLNTYGF RKVDPDRWEF ANEGFLRGQK HLLKNITRRK PAHGQGPQHQ QQANTQTSSV  120
GACVEVGKFG LEEEVERLKR DKNVLMQELV RLRQQQQSTD NQLQTMVQRL QGMEQRQQQM  180
MSFLAKAVQS PGFLAQFVQQ QTESSRRISE ANKKRRLKQD GVTESENATP PDGQIVKYQP  240
LGNDSTQAML RQLRNLDANY NSNSDNFYIG DSSSTSAMEN KTQANRVSGV TLQEVPPTSV  300
PAYVIPTSQI GAGGPDGAVV SKIKSPPVMT SSETVSTPAL SEISGLLSPE TIPSVSLPQT  360
NSVMPEISSL PDIVHNSVDI PGENFLLNET GDGDFMDLTS VDFDGTIPIE LPPDADLDLF  420
LDEDSWDQFI NRNNLIPCDY NEPEMPNVEN SAEVKEVQPL DNGWDKRQRM DQLTERMGLL  480
NSDNQLV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1212219NKKRRLKQ
2213218KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-127HSF family protein