PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018428-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 586aa MW: 66908.5 Da PI: 6.693

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018428-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.6	1.6e-11	52	125	17	87
E--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 17 vlpkkfaeeh...ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +l ++ + + + + +s + + d +s ++W ++l + ++++ +y ++kGW +F++a+gL +gD+v+F++++ AUR62018428-RA 52 SLADEYGS-IflaE--QDRSGHVLFIDiQSKKVWGFYLEFseDQSDYKYKFGKGWLQFAQAKGLTVGDSVTFYRQRA 125 55555552.23422..234456777785777*****9965666666***********************6554 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MDSGAHRRHR IMERSSRDRG SSSQQESIKK PAQLELLFCK ELQKQDTTGF CSLADEYGSI 60 FLAEQDRSGH VLFIDIQSKK VWGFYLEFSE DQSDYKYKFG KGWLQFAQAK GLTVGDSVTF 120 YRQRATDLFF IDCLPKEPSV LDQISSSNQT TLTLLFDSPF LHYLSLFPED HEIKRDTWIQ 180 LGQAAGLFAD ASLASIASSF EVYQSEGYLY PSRYDETTGK LWYKVTDLVP NHVTNSERTH 240 LKIDLDVPLD SLCCEKSKFE HVTMWSFPSN VIPVLEKFIN LRTLWFLNGH RSCVNHVPYD 300 FFTSLKHLQI LNLSCTKITE LPCSIGHVRG LRYFDLSETL VKNLPETVCH LKELQTLKLK 360 NCCGLITLPK DTTRLEKLQH LHLGVHTYLH CMPPWPWCTY SPLYIVAIRH WLQGSRPKHQ 420 GTAEEPGAQV DRKSAELTTR LLSACGRTQT SNTSRIIEHN DGIDDKVAFP KLKKFALISL 480 LSLEEWKDVH KSDFPSLLKL ELKDCPQLVT ICSLSDMHSL QHLEISNCPL LQSLPEGRLP 540 ASVEELLIED CPLLKHSCSK PDGEDWHKIE HVGSIWIDFE GISSR*

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MDSGAHRRHR IMERSSRDRG SSSQQESIKK PAQLELLFCK ELQKQDTTGF CSLADEYGSI  60
FLAEQDRSGH VLFIDIQSKK VWGFYLEFSE DQSDYKYKFG KGWLQFAQAK GLTVGDSVTF  120
YRQRATDLFF IDCLPKEPSV LDQISSSNQT TLTLLFDSPF LHYLSLFPED HEIKRDTWIQ  180
LGQAAGLFAD ASLASIASSF EVYQSEGYLY PSRYDETTGK LWYKVTDLVP NHVTNSERTH  240
LKIDLDVPLD SLCCEKSKFE HVTMWSFPSN VIPVLEKFIN LRTLWFLNGH RSCVNHVPYD  300
FFTSLKHLQI LNLSCTKITE LPCSIGHVRG LRYFDLSETL VKNLPETVCH LKELQTLKLK  360
NCCGLITLPK DTTRLEKLQH LHLGVHTYLH CMPPWPWCTY SPLYIVAIRH WLQGSRPKHQ  420
GTAEEPGAQV DRKSAELTTR LLSACGRTQT SNTSRIIEHN DGIDDKVAFP KLKKFALISL  480
LSLEEWKDVH KSDFPSLLKL ELKDCPQLVT ICSLSDMHSL QHLEISNCPL LQSLPEGRLP  540
ASVEELLIED CPLLKHSCSK PDGEDWHKIE HVGSIWIDFE GISSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01500.1	1e-06	B3 family protein