PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018123-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 457aa MW: 50026.2 Da PI: 8.662

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018123-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.9	1e-33	205	261	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgse+prsYYrCt+++Cpvkkkvers d++++ei+Y+g+Hnhe AUR62018123-RA 205 DDGYNWRKYGQKQVKGSEYPRSYYRCTTPNCPVKKKVERSF-DGHITEIIYKGQHNHE 261 8**************************************.*************8 PP
2	WRKY	103.2	1.4e-32	347	405	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+ gC+v+k+ver+++d ++v++tYeg+Hnh+ AUR62018123-RA 347 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTMGCKVRKHVERASTDYSAVITTYEGKHNHD 405 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MSDHFKDIHK LFGQPPSQQQ QQRPSPGALG VSPGGLTNLF SDPFPESEFR SFSDLLAGAI 60 ATQLPASGEL SWGSDNKGQN DQNGGDVGNS SFKQNRPVGL VLPPVAPVFN ISPGFSPSAF 120 LNSPTFLSPL GMSPQQTLAH ITAQGHLNIQ PDTNQHSSIN SSMSNYQPTI FNSCTASRHP 180 TVPDHPSHER RPHTNFPVAV DKPADDGYNW RKYGQKQVKG SEYPRSYYRC TTPNCPVKKK 240 VERSFDGHIT EIIYKGQHNH ERPQTGRRGK DSGLLQLAAG SGSEGQFGNS VWPGGVGREH 300 DSAQATSIQL HGPSDSEESG QSDGSFTRTT MTEPKIVVQT RSDVDLLDDG YRWRKYGQKV 360 VKGNPNPRSY YKCTTMGCKV RKHVERASTD YSAVITTYEG KHNHDVPATR GSNNTASNID 420 TTQMKIHNSV GQVNFGTNND QRPITLRLKE EELVIS*

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MSDHFKDIHK LFGQPPSQQQ QQRPSPGALG VSPGGLTNLF SDPFPESEFR SFSDLLAGAI  60
ATQLPASGEL SWGSDNKGQN DQNGGDVGNS SFKQNRPVGL VLPPVAPVFN ISPGFSPSAF  120
LNSPTFLSPL GMSPQQTLAH ITAQGHLNIQ PDTNQHSSIN SSMSNYQPTI FNSCTASRHP  180
TVPDHPSHER RPHTNFPVAV DKPADDGYNW RKYGQKQVKG SEYPRSYYRC TTPNCPVKKK  240
VERSFDGHIT EIIYKGQHNH ERPQTGRRGK DSGLLQLAAG SGSEGQFGNS VWPGGVGREH  300
DSAQATSIQL HGPSDSEESG QSDGSFTRTT MTEPKIVVQT RSDVDLLDDG YRWRKYGQKV  360
VKGNPNPRSY YKCTTMGCKV RKHVERASTD YSAVITTYEG KHNHDVPATR GSNNTASNID  420
TTQMKIHNSV GQVNFGTNND QRPITLRLKE EELVIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	1e-103	WRKY family protein