PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018103-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 114aa MW: 12613.4 Da PI: 10.0822 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.5 | 1.3e-17 | 14 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g t ++Ia +++ +Rt++++k++w+++l AUR62018103-RA 14 KGPWTPEEDQKLLAYIEEHGHGnwralpTKAAIATHLP-KRTDNEIKNYWNTHL 66 79********************6666666678999999.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MGRSPCCDKL GLKKGPWTPE EDQKLLAYIE EHGHGNWRAL PTKAAIATHL PKRTDNEIKN 60 YWNTHLKKRL AKMGIDPVTH KPKNDALLPA ANGGSGQQSK NAANLSHIAQ WESA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 6e-56 | MYB family protein |