PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018057-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23449.3 Da PI: 4.8335 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.3 | 6.1e-21 | 37 | 86 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp++ r++lg+f ++eeAa+a++aa+kk++g AUR62018057-RA 37 VYRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTFNSPEEAARAYDAAAKKIRG 86 69*******.**********954...4*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MNLLGSPFDG VKTHQEDVNR AERVANPSQT PRTRKNVYRG IRRRPWGKWA AEIRDPRKGV 60 RVWLGTFNSP EEAARAYDAA AKKIRGDKAK LNFPDTPPLP PSPLLTAPLE EIFLPVAKRQ 120 RISDFTESST LSNESTQMPM MSMGFYGDGV DHLTSEEDFV NGMNNNDLSQ QILDLESLLG 180 LDHGVELAES DSTSLPWVMD EFPMINGYD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 6e-34 | ERF family protein |