PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017943-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 276aa    MW: 30435.3 Da    PI: 9.3338
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017943-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.6e-2179128255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa+a+++a++k++g
  AUR62017943-RA  79 KYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEAAARAYDEAALKFRG 128
                     8********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MNMMMKEILS PMIPGFSRER EMHEMVSALT HVVSGAAASS TMRHGHGNLV SSYSYPYLPL  60
KGTNITPLPQ VGAEPSRRKY RGVRQRPWGK WAAEIRDPYK AARVWLGTFD TAEAAARAYD  120
EAALKFRGSK AKLNFPENVT FQNAPANIPA IHLTISNSPA TLLPASRNNE ELVQNQPLEF  180
LQETGDYKDY IDYSRLISGS FDSNDGDYRS LSLLDQMLMS SSLSSPPLPQ QQQGGSSVSL  240
PSSSMSTSPL AYPTDEIIPR GSQRKIKESK NLSYN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.13e-36ERF family protein