PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62017522-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 161aa MW: 18800.3 Da PI: 6.6765 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.1 | 2.5e-16 | 58 | 155 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+ ++ ps+v++ r ++p +++++h + + ++ ++l+ + +s+ v+l+ ++ ++++ + GWk+Fv +L++gD +vF+l+ ++ ++ AUR62017522-RA 58 FKVIMQPSYVSNGFRYSFPIRHVRRHlKPLEVQQ--IQLKAtDHEKSYPVRLNLYNHNSQVFAGFGWKKFVLNYNLQAGDGCVFELVCPQSNAYK 150 6778999*******************63333454..566553488*******999999999**************************9988889* PP EEEE- CS B3 94 vkvfr 98 v++fr AUR62017522-RA 151 VTIFR 155 **998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MELQKENNNV MFLGKGWEVF MEFYNLEYED DDVAIDESME QTDVESRLEA YKTKNPHFKV 60 IMQPSYVSNG FRYSFPIRHV RRHLKPLEVQ QIQLKATDHE KSYPVRLNLY NHNSQVFAGF 120 GWKKFVLNYN LQAGDGCVFE LVCPQSNAYK VTIFRVAATT * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-12 | B3 family protein |