PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62017475-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 179aa MW: 19896.8 Da PI: 6.9742 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +gr++AeIrdps+ + r++lg+f+taeeAa a+++a ++++g AUR62017475-RA 22 KFLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRASRSMRG 71 577******.**********965...5*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence |
MFKSKSSKTT PQQQEGANPP IKFLGVRRRP WGRYAAEIRD PSTKERHWLG TFDTAEEAAL 60 AYDRASRSMR GPRGRTNFVY SDMPPGSSVT SIMSPDEQHQ NHNHEKVQNH THQPEFSLST 120 SNDYGYTAGS WADPTVGADY MGFDSTNAGY VHSPLFSSMP PVDHGLDPFN LGSSSYFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13910.1 | 8e-48 | ERF family protein |