PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017462-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 782aa MW: 89060.8 Da PI: 8.1441

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017462-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.9	1e-15	344	431	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA + GFs+rk k ++ + r++vCs+ g +++++k ++ ++ rt C+a + +++g+w k + +HnH++ AUR62017462-RA 344 EMYNDYAFRHGFSIRKGKVRYVGSSSVWRGRNYVCSNAGLKDTSSKV--PRKYSKLDYRTCCEAYIDFVIDEKGVWTAVKHNMDHNHAMI 431 58**************************************99877..9999999*****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 782 aa Download sequence
MHDNSFDPEL RVSELIDLQC GKWDANILHQ HFSDEVWSRH ELDDLIADSP RHNPFSEWLA 60 WMSNRVDRNV LRRLLTIAWV VWFCRNKLVY ANEQLDICFV AEGFLRMVHE HSVECSSSTS 120 WSSQPDTEDD RMIALMLTEE YSQLDGAVAR RLTNLAPIPV IPRINSFIPT VNDANLDHQR 180 LLQRLQVYGL FEVKVSGDGN CQFRALSEQM FKSPDYHKLV RKEVVKQLKE HRSLYENYVP 240 MKYKHYYKKM AKNGEWGDHI TLQAAADKFA VKICLLTSFR DTCFIEIVPQ YQAPKRDAWL 300 SFWSEVHYNS LYELRVYKYE VVYEESEKSE LQWKQVNSDA DAYEMYNDYA FRHGFSIRKG 360 KVRYVGSSSV WRGRNYVCSN AGLKDTSSKV PRKYSKLDYR TCCEAYIDFV IDEKGVWTAV 420 KHNMDHNHAM IPVEKRYLLR SQRKIQGEHL KFIRTMKASG VRVTDSLRAL RKEVGGSPNL 480 CYTVTDVYNT LAIEKAGRLE GGDCNALIKS FAARQAKESD FYYEFEVDGN HALCSVFWRD 540 GRMRRDYEAF GDLMVFDTTY RTNKYGMICA PFVGMNHHCN NVMFGMSFVL DEKTSSFVLD 600 DDGDPLIYSH PTTQGSNLSV LPKRKNVQSK NSKSSTNASH SSLANVFEGH SSNNFPRPNS 660 SQPCSSKASN SFSTTNVQSS SGNFSSASHP TFSNVFGHQA STNSSQPSSS KASNSFSTSK 720 PPLSNVFAHQ ASTNFPATVS QSSSRNVFEG QSSDNIPVPN SSQPSPSKAS NTFPRTNAQP 780 SS

Sequence ? help Back to Top

Protein Sequence Length: 782 aa Download sequence

MHDNSFDPEL RVSELIDLQC GKWDANILHQ HFSDEVWSRH ELDDLIADSP RHNPFSEWLA  60
WMSNRVDRNV LRRLLTIAWV VWFCRNKLVY ANEQLDICFV AEGFLRMVHE HSVECSSSTS  120
WSSQPDTEDD RMIALMLTEE YSQLDGAVAR RLTNLAPIPV IPRINSFIPT VNDANLDHQR  180
LLQRLQVYGL FEVKVSGDGN CQFRALSEQM FKSPDYHKLV RKEVVKQLKE HRSLYENYVP  240
MKYKHYYKKM AKNGEWGDHI TLQAAADKFA VKICLLTSFR DTCFIEIVPQ YQAPKRDAWL  300
SFWSEVHYNS LYELRVYKYE VVYEESEKSE LQWKQVNSDA DAYEMYNDYA FRHGFSIRKG  360
KVRYVGSSSV WRGRNYVCSN AGLKDTSSKV PRKYSKLDYR TCCEAYIDFV IDEKGVWTAV  420
KHNMDHNHAM IPVEKRYLLR SQRKIQGEHL KFIRTMKASG VRVTDSLRAL RKEVGGSPNL  480
CYTVTDVYNT LAIEKAGRLE GGDCNALIKS FAARQAKESD FYYEFEVDGN HALCSVFWRD  540
GRMRRDYEAF GDLMVFDTTY RTNKYGMICA PFVGMNHHCN NVMFGMSFVL DEKTSSFVLD  600
DDGDPLIYSH PTTQGSNLSV LPKRKNVQSK NSKSSTNASH SSLANVFEGH SSNNFPRPNS  660
SQPCSSKASN SFSTTNVQSS SGNFSSASHP TFSNVFGHQA STNSSQPSSS KASNSFSTSK  720
PPLSNVFAHQ ASTNFPATVS QSSSRNVFEG QSSDNIPVPN SSQPSPSKAS NTFPRTNAQP  780
SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-37	FAR1 family protein