PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AUR62017314-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 279aa MW: 32022 Da PI: 6.7988 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.6 | 8.6e-08 | 227 | 260 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + AUR62017314-RA 227 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 260 469*****************************87 PP | |||||||
2 | ELK | 25.6 | 2.9e-09 | 181 | 202 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ AUR62017314-RA 181 ELKIELKQGFKSRIEDVREEIL 202 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 279 aa Download sequence |
MAGEMAFSDQ YRQLKAEIAT HPLYEQLLAA HVACLRVATP IDQLPLIEAQ YNQSHNLFRS 60 YATNSQHNHS LSPHERQDLD NFLAQYLLVL CSFKEQLQNH VRVHAVEAVM ACREIEQNLQ 120 NLTGATLGEG TGATMSDDED DLQLEYSMDQ SSGGDAHDMM GFGPLLPTES ERSLMERVRH 180 ELKIELKQGF KSRIEDVREE ILRKRRAGKL PGDTTSVLKA WWQQHSKWPY PTEDDKAKLV 240 EETGLQLKQI NNWFINQRKR NWHNNSQSAN TLKSKRKR* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 258 | 278 | RKRNWHNNSQSANTLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G62990.1 | 1e-153 | TALE family protein |