PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017296-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 178aa    MW: 19241.7 Da    PI: 4.6527
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017296-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-161664255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+  +++ g+Wv+eIr+p++   ++r++lg++ tae+Aa+a++aa+++l+g
  AUR62017296-RA 16 LYRGI--RPRGGKWVSEIREPRK---TTRIWLGTWPTAEMAAAAYDAAALALKG 64
                    69***..699**********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MSTALPAVSP TGKHPLYRGI RPRGGKWVSE IREPRKTTRI WLGTWPTAEM AAAAYDAAAL  60
ALKGSEAVLN FPDDVLRYPV PNSNSPADIR NAAATAAAMK QERERKIGDE LKNVGKKGAE  120
EEFIDMEALF NMPNLLVDMA GGMMVSPPRL SGTGDHDYDM GEDDCDVGES GSLWNYD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-41ERF family protein