PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017288-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 594aa    MW: 66892.4 Da    PI: 6.7617
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017288-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS410.81.3e-1252105761373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     lv+ L++c+e ++s++  ++++++a+l e+asp+g +++ Rl+ayfteALa r++r +++++++  p+e ++ + ++ +aa++l++++sPi+kf 
  AUR62017288-RA 210 LVSFLMSCVEGIASRNVPAINHFIAKLGEQASPRGrSTISRLTAYFTEALALRVTRLWPRMFHISVPRELDRFDDESGAAAFRLLNQISPIPKFI 304
                     5788*******************************8899********************************9999999***************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+taN+++l+a+eg+++vH+iDfd++qGlQWp ++q+La+R+++p ++RiTg+g+    sk+el etgerLa+fAe++++pfef++ v++rled+
  AUR62017288-RA 305 HFTANEMLLRAFEGKDKVHVIDFDVKQGLQWPGFFQSLATRRNPPSHVRITGIGE----SKQELVETGERLASFAEAFNLPFEFHP-VVDRLEDV 394
                     *******************************************************....***************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l++L+vk+gE++a n++lqlh++l +  +   + ++++ +++s++P  +v++eqea+hn++++  r++++l+yysa+fds++++lp +s +r+k
  AUR62017288-RA 395 RLWMLHVKEGESVAANCILQLHKTLYDANNG--AFRDFMGIIRSTNPIALVMAEQEAEHNEPTLEMRVCNSLRYYSAIFDSIDSSLPFDSPARVK 487
                     *************************555444..4599********************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv.lgWkdrpLvsvSaW 373
                     +E++ +grei+n+vaceg++r+er+e++++W++r+e+ GF+ ++ +e+++ q ++ll++++++ y+ve++ ++ + l W+d+pL++vS W
  AUR62017288-RA 488 IEEM-FGREIRNIVACEGSDRIERNEKFGNWKRRMEQEGFRGIRRDEREVFQSQMLLKMYSNERYNVEQQGDEGItLRWMDQPLYTVSLW 576
                     ****.********************************************************999****88555555************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MLAGCSSTLL SPRHRLRSEA SACHYPLPSM STQRLDLPCN FSRKEVSVTR PPQSIRGLSV  60
EKPIETKGLK QTIKVPPSPE GRREIKAEFW GEKGKNLKRR FREEERRVCF GAPTDVVSPP  120
PLPPLSHNPW IGSGVTEITE YGEPSHGPVT TTTSGSSSSS ESHSLGLRLN ENVSEHEYGN  180
GSVNPNPGDG SRAVRTHNDD DHTEQQGFEL VSFLMSCVEG IASRNVPAIN HFIAKLGEQA  240
SPRGRSTISR LTAYFTEALA LRVTRLWPRM FHISVPRELD RFDDESGAAA FRLLNQISPI  300
PKFIHFTANE MLLRAFEGKD KVHVIDFDVK QGLQWPGFFQ SLATRRNPPS HVRITGIGES  360
KQELVETGER LASFAEAFNL PFEFHPVVDR LEDVRLWMLH VKEGESVAAN CILQLHKTLY  420
DANNGAFRDF MGIIRSTNPI ALVMAEQEAE HNEPTLEMRV CNSLRYYSAI FDSIDSSLPF  480
DSPARVKIEE MFGREIRNIV ACEGSDRIER NEKFGNWKRR MEQEGFRGIR RDEREVFQSQ  540
MLLKMYSNER YNVEQQGDEG ITLRWMDQPL YTVSLWGSVD AAAGSSSSFS QPI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein