PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017275-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 300aa    MW: 32484.9 Da    PI: 4.9487
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017275-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1162.3e-36371282102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++lisw+++g+sf+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g+k ll++
  AUR62017275-RA  37 FLTKTYQLVDDPAVDDLISWNDDGSSFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDCFKRGEKALLRD 122
                     9*****************************************************************99.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  AUR62017275-RA 123 IQRRKI 128
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MHPMPVDQND DSAGGGGAAT GSGNASDSQQ RTLPTPFLTK TYQLVDDPAV DDLISWNDDG  60
SSFIVWRPAE FARDLLPKYF KHNNFSSFVR QLNTYGFRKV VPDRWEFAND CFKRGEKALL  120
RDIQRRKISP APAINSPTTA VACPTAVPAA VTVVAPPPVA IRAVSPANSG DEQVHSSNSS  180
PAPGTTTLQR VASGATTTEI LEENERLRRE NLTLSQELNH LRGLCNNILA MMSNYATGQT  240
EPSGLPEERQ LELLPAKPIT AVEADHGAKR VRRDDDEASG EREGSDPVHT QQEQQGSGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11660.17e-69HSF family protein