PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017063-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 274aa    MW: 31497.6 Da    PI: 9.9235
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017063-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.52.7e-14123200186
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     f+k+l++++vl +  l lp +f+++h ++  +  +ltl de g++ + k+  r ++    +++GW++F+  +gL +gD++vF+l++
  AUR62017063-RA 123 FVKALLQAHVLGN--LNLPTTFCKTHLLNYDG--MLTLVDEGGKKCQTKFHLRYGR----FGSGWRRFAINHGLVDGDVLVFQLIE 200
                     8899988888876..9**********666434..8***************555555....9**********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MVTKXXXXXX XSYEEKRKQR LEENKKRMMQ LNIPQLSQSL KPSPATRLKR VNPKPLNAPL  60
RRSTRMADKP SPDYHDFILV GGRKLPLRRN LYSQDNASNQ KRFDAVQRAE ELELRLGSQH  120
PTFVKALLQA HVLGNLNLPT TFCKTHLLNY DGMLTLVDEG GKKCQTKFHL RYGRFGSGWR  180
RFAINHGLVD GDVLVFQLIE PTTLKKFPTP SCNNHLLDHD GILTLVYEDG DKCLIKFHLL  240
YNEAWLWMER ILHTDHGLVD GIDFVSQLIE PAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-39B3 family protein