PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016954-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 328aa    MW: 36484.8 Da    PI: 8.9151
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016954-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM130.51.3e-40151281128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+v+yLk+k+++++l++  +i+e+         +      +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
  AUR62016954-RA  15 LPPGFRFHPTDEELIVHYLKRKASSSPLPV-AIIAEA---------IF-----GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTS 94 
                     79*************************999.667663.........32.....689************************************998 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++++vg+kk Lvfy g+ p+g ktdW+mheyr+
  AUR62016954-RA  95 nGNQKVGVKKALVFYGGKPPRGIKTDWIMHEYRV 128
                     67788***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MESTDSSSTQ PYPQLPPGFR FHPTDEELIV HYLKRKASSS PLPVAIIAEA IFGEQEWYFF  60
SPRDRKYPNG ARPNRAATSG YWKATGTDKP ILTSNGNQKV GVKKALVFYG GKPPRGIKTD  120
WIMHEYRVID ANSSSKLPHP LVDHPSKKAS LRLDDWVLCR IYKKNNTQRP MDHERDDLIE  180
EMIKQQKLMR TICSKNTPSS GLLMDHTNND QNIYEFSKLG PSASRHDLYG MQGDDNNNRE  240
HLYWDDPMGS LGSSSGRRFH HPQSDQTTGS TGTDGNSSSF VSMLSQLPQG INTSGVPFSM  300
GSPLLVGNIG DGVLRPPFQL SGGTWNS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-87NAC family protein