PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016828-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family DBB
Protein Properties Length: 212aa    MW: 23213.1 Da    PI: 5.6117
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016828-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.11.5e-07433534
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                     C+ +e   +++fC  ++  lC+ C ++ H
  AUR62016828-RA  4 LCDVCEGAAAIFFCAADEAALCRACDEKVH 33
                    7******99******************998 PP
2zf-B_box27.47.1e-095392338
        zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                     +kC+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  AUR62016828-RA 53 VPKCDICENAPAFFYCEIDGSSLCLQCDMVVHVGgkrtHR 92
                    689*****************************66666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MRTLCDVCEG AAAIFFCAAD EAALCRACDE KVHMCNKLAS RHIRVGLAAP NAVPKCDICE  60
NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HRRYLLLRQR AEFPGDKYVN VEDMSSQGTQ  120
GDQMEVRREP NQSSDAIVME KEQNHVVHVD GNGVSDAQMD NKMIDLNARP QRTSGQSPNN  180
NQTQGMDYVP GTNGDSASVV PVRSFKSEPE K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-69DBB family protein