PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016749-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 110aa    MW: 12671.3 Da    PI: 9.4513
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016749-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.71.2e-071053344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT    +++ +a +++ ++   +W  +ar +  g++++++k ++
   AUR62016749-RA 10 PWTGKQNKQFERALALYDKDtkdRWQNVARLVE-GKSAEEVKRHY 53
                     8********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MASSRNMNTP WTGKQNKQFE RALALYDKDT KDRWQNVARL VEGKSAEEVK RHYEILLEDL  60
NRIEAGRVPI PNYRQSTGNS MNFNEEQRQL SLKGSYLTTA SVMLYQCVL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.11e-36MYB_related family protein