PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016657-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 290aa MW: 33612.5 Da PI: 9.2603 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 45 | 2e-14 | 30 | 116 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p ++l++++ ++p +fa+++ +k +s+ ++l ++sW vk+ +kk+++ + +GW +F k+n +++g +++Fk++g+ +f ++ +f+ AUR62016657-RA 30 VMPTSNLQESMQRIPCEFASKFRSK--SSVSVSLSG-ANNSWIVKV--SKKKNKLQFCTGWDKFIKDNSVDDGSMILFKYKGDCRF--KFCIFD 116 458888888999*********9877..777788555.78*******..99999988999***********************9999..777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MSNRTYLRRK RPVETSDDPG EVKSWRFLRV MPTSNLQESM QRIPCEFASK FRSKSSVSVS 60 LSGANNSWIV KVSKKKNKLQ FCTGWDKFIK DNSVDDGSMI LFKYKGDCRF KFCIFDPAGC 120 ETLPCHIHDG KQKIDSCSEK RREVYEEDFE EKPLLNPPMS SSKEDVNHAI NYEDNTKLEE 180 FLVSLKNPFF FAKNSSRSEL VIPKEIIYTF GIQFDEPFSI EDPKKRNWEV RVVTWKDGRV 240 RLTGWNKVRK CNLITDKDAC VCELIPTNVP TYGSIKVHIF RNQKKPATF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 9e-12 | B3 family protein |