PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016606-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 22792.9 Da PI: 10.7902 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 68.1 | 1.7e-21 | 76 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +grW AeIrd + g r r++lg+f+t+eeAa+a++aa+++l+g AUR62016606-RA 76 KKYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTPEEAARAYDAAARRLRG 126 59********.**********55...2.59************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
LSPVLEGIAV VVGQHVLFGT TPTTKPTTCK EAKVEVSNPN PNAPKRFESE NERKNVSEKQ 60 SNPKAKRFET STGVEKKYRG VRKRPWGRWS AEIRDRVGRC RHWLGTFDTP EEAARAYDAA 120 ARRLRGSKAK TNFQVPSVVP TSTSTTLSPT SSSSSSSYEF IKNINNPTTT TMYKKKCQVV 180 TSMSQLVTKN RFMELIDLNV GVHK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 1e-22 | ERF family protein |