PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016449-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 392aa    MW: 45151.9 Da    PI: 7.0893
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016449-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-18341161099
                     HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     ++++ +l++p+kf+ e+ + +   s   tl+ +sg+ W+v++  +k+ + +++++GW +Fv ++g+k g f+vF+++g+s+f   v+vf++
  AUR62016449-RA  34 NFEQ-QLRIPRKFV-ECsKAD--LSSSCTLRGQSGNIWKVQI--QKTEKDVLFADGWGNFVTDHGIKYGCFLVFSYVGDSSF--EVSVFDA 116
                     4554.6********.662434..66689**************..**************************************..9999986 PP
2B3474.5e-15279356887
                     -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      +v +   l++pk+ a +h ++k ++ +++l+ +   +sW+v ++++ ++++  ++ GW+ Fv +n+L+e D++vF+l ++
  AUR62016449-RA 279 THVYRGFHLTIPKEWAVKHLLQK-SDHDVILRVPGVeESWTVGCRWTPSQCQ--FRPGWSTFVFENNLEEHDVCVFELLQK 356
                     57778888***********7776.45699*9996655*******88888877..89*********************8754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MTHICETCKA LEEDKYWNEI PPRKHRFFKL TIGNFEQQLR IPRKFVECSK ADLSSSCTLR  60
GQSGNIWKVQ IQKTEKDVLF ADGWGNFVTD HGIKYGCFLV FSYVGDSSFE VSVFDATGCE  120
VEGSHFTRNT NMSLNTTCRS LLHVENDESK GDRTLQADID DSVEVIAVED EEHDSDSSSQ  180
ENNFRGSKSS KCKDADNRTE IVHEEEDLES LSDSSHNVKR FHNLSLNVRN RACQVRQPQK  240
YYKSNRRKVT EQEKQGALSK AISHMSKRRH MIEIVMKCTH VYRGFHLTIP KEWAVKHLLQ  300
KSDHDVILRV PGVEESWTVG CRWTPSQCQF RPGWSTFVFE NNLEEHDVCV FELLQKGDLS  360
NKKYSVFDVH IFRVVKEVVP LTVLRGIKYS V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-33B3 family protein