PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016268-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 922aa    MW: 104923 Da    PI: 8.481
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016268-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.14.2e-10214311198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                     f+ v+ ps+v k+  lv+p +   +  + +k+  ++++l++ ++++W v ++ +++ g   +++GWk+F+ +n L+e D ++F    ++ ++f l
  AUR62016268-RA 214 FIMVMRPSHVYKRFSLVIPQNWKPKGfSRDKR--QDVILRT-NNNTWVVSFCTSNNHGYGGFEGGWKKFAFDNFLEEFDLCLFVPGgQEnKRFVL 305
                     778999***************97555544544..4788776.89*******99888888899**********************66244577777 PP

                     EEEEE- CS
              B3  93 vvkvfr 98 
                      v++fr
  AUR62016268-RA 306 DVSIFR 311
                     777776 PP

2B343.94.3e-14525610898
                     -HHHHTT-E.E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   8 sdvlksgrl.vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     s v++ ++   lp kf+ ++   +     + +++    +g sW+v+l  +k ++  ++ ++GWkeF++a  Lk  D++vFk+++r++f   v +f
  AUR62016268-RA 525 STVFSMCLKqKLPEKFC-DYmrtM----LPEQIV-LKVNGISWNVNL--KKDKDDiMFHGDGWKEFANAYSLKKADVLVFKYNRRECF--EVWLF 609
                     555555533579*****.663433....444455.5569********..777777455679**********************99***..66666 PP

                     - CS
              B3  98 r 98 
                     +
  AUR62016268-RA 610 D 610
                     5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    
MLTGDVWKEF VKAYSLQKND LVIFKYDRTD KSFEVFFIDQ TNSCERESSY FVRKFEQPQY  60
NGGLDEQAKS DSYIICSSDS TAHADHDLAE KQDEDERRES NKDRSTSKQQ NSLKENERFD  120
KDERDKRRAF IEDDSTLKKN NSSKVNGSNS KKTHSYSAAC DNNSDDVPLH ENMKRKSSTV  180
VAAACYRSNR RPVTDAEKEK ALALASKNAI GESFIMVMRP SHVYKRFSLV IPQNWKPKGF  240
SRDKRQDVIL RTNNNTWVVS FCTSNNHGYG GFEGGWKKFA FDNFLEEFDL CLFVPGGQEN  300
KRFVLDVSIF RVVPEITPLS PKLPKKFTSN EIAKLPENVI VKGPNGIIWH VNLLSNDSNH  360
VLFFDQTNSC ERESSDFVRK CEQPQSNYGG LDEQAKSDSL KNIICSSDST AHTDQDFDDE  420
QDEDEPRESN KDRSTSKQPN SLKENPSTPK EALSNHLRKR KFTRFDKDER DKRKAFIIED  480
DSISKKNKSL KVNGSYLKKA HSHTAARDSN RDYVPIYVRT SRKSSTVFSM CLKQKLPEKF  540
CDYMRTMLPE QIVLKVNGIS WNVNLKKDKD DIMFHGDGWK EFANAYSLKK ADVLVFKYNR  600
RECFEVWLFD QASSCEKETS YFVRKVQQQN SDDDDSEDTE ESLSKRFTDD TRQDDYDDCH  660
HGSRNRRRKN PGSRTPKSSS AKTARSRDVS DDQDESDENS DEEDSISEEA RITPKKAATT  720
SSARILPTNG SRKRNRNGGS RVYYKSNRRE ITDAEIANAE RKASSASEQC ANSFTVVMRP  780
TSVYKRFFMA KKVCKMNMKA LLLASFVVSL AFTVAKANVG FAVYHTHNTP SACYQNEDKG  840
PWITGVSHAL WNNRGACGRN YKVTCIGGAN MAPHPCRGGS VIVKVTDLCD SCAGDLNLSQ  900
EAFNAIADPK AGKIRIRYDP V*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1458488RKRKFTRFDKDERDKRKAFIIEDDSISKKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-15B3 family protein