PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016268-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 922aa MW: 104923 Da PI: 8.481 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.1 | 4.2e-10 | 214 | 311 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 f+ v+ ps+v k+ lv+p + + + +k+ ++++l++ ++++W v ++ +++ g +++GWk+F+ +n L+e D ++F ++ ++f l AUR62016268-RA 214 FIMVMRPSHVYKRFSLVIPQNWKPKGfSRDKR--QDVILRT-NNNTWVVSFCTSNNHGYGGFEGGWKKFAFDNFLEEFDLCLFVPGgQEnKRFVL 305 778999***************97555544544..4788776.89*******99888888899**********************66244577777 PP EEEEE- CS B3 93 vvkvfr 98 v++fr AUR62016268-RA 306 DVSIFR 311 777776 PP | |||||||
2 | B3 | 43.9 | 4.3e-14 | 525 | 610 | 8 | 98 |
-HHHHTT-E.E--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 8 sdvlksgrl.vlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 s v++ ++ lp kf+ ++ + + +++ +g sW+v+l +k ++ ++ ++GWkeF++a Lk D++vFk+++r++f v +f AUR62016268-RA 525 STVFSMCLKqKLPEKFC-DYmrtM----LPEQIV-LKVNGISWNVNL--KKDKDDiMFHGDGWKEFANAYSLKKADVLVFKYNRRECF--EVWLF 609 555555533579*****.663433....444455.5569********..777777455679**********************99***..66666 PP - CS B3 98 r 98 + AUR62016268-RA 610 D 610 5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 922 aa Download sequence |
MLTGDVWKEF VKAYSLQKND LVIFKYDRTD KSFEVFFIDQ TNSCERESSY FVRKFEQPQY 60 NGGLDEQAKS DSYIICSSDS TAHADHDLAE KQDEDERRES NKDRSTSKQQ NSLKENERFD 120 KDERDKRRAF IEDDSTLKKN NSSKVNGSNS KKTHSYSAAC DNNSDDVPLH ENMKRKSSTV 180 VAAACYRSNR RPVTDAEKEK ALALASKNAI GESFIMVMRP SHVYKRFSLV IPQNWKPKGF 240 SRDKRQDVIL RTNNNTWVVS FCTSNNHGYG GFEGGWKKFA FDNFLEEFDL CLFVPGGQEN 300 KRFVLDVSIF RVVPEITPLS PKLPKKFTSN EIAKLPENVI VKGPNGIIWH VNLLSNDSNH 360 VLFFDQTNSC ERESSDFVRK CEQPQSNYGG LDEQAKSDSL KNIICSSDST AHTDQDFDDE 420 QDEDEPRESN KDRSTSKQPN SLKENPSTPK EALSNHLRKR KFTRFDKDER DKRKAFIIED 480 DSISKKNKSL KVNGSYLKKA HSHTAARDSN RDYVPIYVRT SRKSSTVFSM CLKQKLPEKF 540 CDYMRTMLPE QIVLKVNGIS WNVNLKKDKD DIMFHGDGWK EFANAYSLKK ADVLVFKYNR 600 RECFEVWLFD QASSCEKETS YFVRKVQQQN SDDDDSEDTE ESLSKRFTDD TRQDDYDDCH 660 HGSRNRRRKN PGSRTPKSSS AKTARSRDVS DDQDESDENS DEEDSISEEA RITPKKAATT 720 SSARILPTNG SRKRNRNGGS RVYYKSNRRE ITDAEIANAE RKASSASEQC ANSFTVVMRP 780 TSVYKRFFMA KKVCKMNMKA LLLASFVVSL AFTVAKANVG FAVYHTHNTP SACYQNEDKG 840 PWITGVSHAL WNNRGACGRN YKVTCIGGAN MAPHPCRGGS VIVKVTDLCD SCAGDLNLSQ 900 EAFNAIADPK AGKIRIRYDP V* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 458 | 488 | RKRKFTRFDKDERDKRKAFIIEDDSISKKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 3e-15 | B3 family protein |