PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016265-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 640aa    MW: 73076.2 Da    PI: 8.4057
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016265-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.6e-17301111198
                     HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     + ++rlvlpkkfa+++   ++ + ++ l+  +g +W v+l  +k ++ ++++ +GW+eF+ka  Lk  D+++Fk++++++f   v +f+
  AUR62016265-RA  30 NFHHRLVLPKKFADHMR--THLPEKVALKV-NGVTWHVNL--EKEKNDVMFRgDGWQEFAKAYSLKKSDMLIFKYNKHECF--EVLIFD 111
                     56789********5554..34666777665.9********..999999777659**********************99**9..888887 PP

2B336.58.5e-12541629396
                     EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                      v+ ps+v ++  l+++k+   + ++   ++++++l+  + ++W+ ++  + +s+ + l +GWk+Fv +n+L+e D++vF  +g+++++lv+ v
  AUR62016265-RA 541 EVMRPSSVRRRFFLSFSKDWKIRRKLR--NDQEVILRV-KEKTWTCTF--SLSSNNVGLLSGWKHFVPDNKLEEDDVCVFVPVGEQNRKLVLDV 629
                     578899999999999999985555555..455677665.88*******..8999999999*********************9998888787765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MESENHKSWE EEIYWKNFHF ARFSLILPTN FHHRLVLPKK FADHMRTHLP EKVALKVNGV  60
TWHVNLEKEK NDVMFRGDGW QEFAKAYSLK KSDMLIFKYN KHECFEVLIF DQANLCEKEA  120
SYFVKKGLQP NSDGSDDSGG EVKETSAEEL TDKNQGDDDS VDILGSRRRK NRDGFDGDDG  180
DDTSDEENSV SSDDFTSPKK TATERVREVP SNFSRKRTYK VSEKSQKTIP KRKKSFALTY  240
NSNRRPVTEA EKEKALKKAR DTSKQYLNSF SVVMRPSCVY KRFFMSIPKE WEPTYVFKKG  300
EEVILRVKEK TWVCTFICNR YTGGFAGGWK RFAVENFLEE FDVCLFVPVA CSNVGKSVLD  360
VSIFRVTPVV VQPSPVTTSN VDVQEIPSED GSLGDDDSDY ASRNRKRQNN SGATPKGHYS  420
GSNPKKGRCE DEGDESSDEE KTSTEDCTPK KAAGTARVRE VTANSNGKSK HNIVMFHSCV  480
DEHDVGFLFQ CLLTSGKTTP DKNGTFCESS VRQATEAEKN QALKKAKIAA AQYKHQYPLI  540
EVMRPSSVRR RFFLSFSKDW KIRRKLRNDQ EVILRVKEKT WTCTFSLSSN NVGLLSGWKH  600
FVPDNKLEED DVCVFVPVGE QNRKLVLDVI IFRARPEID*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215234RKRTYKVSEKSQKTIPKRKK
2561567KIRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.16e-41B3 family protein