PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016265-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | B3 | ||||||||
Protein Properties | Length: 640aa MW: 73076.2 Da PI: 8.4057 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 52.4 | 9.6e-17 | 30 | 111 | 11 | 98 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ++rlvlpkkfa+++ ++ + ++ l+ +g +W v+l +k ++ ++++ +GW+eF+ka Lk D+++Fk++++++f v +f+ AUR62016265-RA 30 NFHHRLVLPKKFADHMR--THLPEKVALKV-NGVTWHVNL--EKEKNDVMFRgDGWQEFAKAYSLKKSDMLIFKYNKHECF--EVLIFD 111 56789********5554..34666777665.9********..999999777659**********************99**9..888887 PP | |||||||
2 | B3 | 36.5 | 8.5e-12 | 541 | 629 | 3 | 96 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 v+ ps+v ++ l+++k+ + ++ ++++++l+ + ++W+ ++ + +s+ + l +GWk+Fv +n+L+e D++vF +g+++++lv+ v AUR62016265-RA 541 EVMRPSSVRRRFFLSFSKDWKIRRKLR--NDQEVILRV-KEKTWTCTF--SLSSNNVGLLSGWKHFVPDNKLEEDDVCVFVPVGEQNRKLVLDV 629 578899999999999999985555555..455677665.88*******..8999999999*********************9998888787765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 640 aa Download sequence |
MESENHKSWE EEIYWKNFHF ARFSLILPTN FHHRLVLPKK FADHMRTHLP EKVALKVNGV 60 TWHVNLEKEK NDVMFRGDGW QEFAKAYSLK KSDMLIFKYN KHECFEVLIF DQANLCEKEA 120 SYFVKKGLQP NSDGSDDSGG EVKETSAEEL TDKNQGDDDS VDILGSRRRK NRDGFDGDDG 180 DDTSDEENSV SSDDFTSPKK TATERVREVP SNFSRKRTYK VSEKSQKTIP KRKKSFALTY 240 NSNRRPVTEA EKEKALKKAR DTSKQYLNSF SVVMRPSCVY KRFFMSIPKE WEPTYVFKKG 300 EEVILRVKEK TWVCTFICNR YTGGFAGGWK RFAVENFLEE FDVCLFVPVA CSNVGKSVLD 360 VSIFRVTPVV VQPSPVTTSN VDVQEIPSED GSLGDDDSDY ASRNRKRQNN SGATPKGHYS 420 GSNPKKGRCE DEGDESSDEE KTSTEDCTPK KAAGTARVRE VTANSNGKSK HNIVMFHSCV 480 DEHDVGFLFQ CLLTSGKTTP DKNGTFCESS VRQATEAEKN QALKKAKIAA AQYKHQYPLI 540 EVMRPSSVRR RFFLSFSKDW KIRRKLRNDQ EVILRVKEKT WTCTFSLSSN NVGLLSGWKH 600 FVPDNKLEED DVCVFVPVGE QNRKLVLDVI IFRARPEID* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 215 | 234 | RKRTYKVSEKSQKTIPKRKK |
2 | 561 | 567 | KIRRKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 6e-41 | B3 family protein |