PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62016155-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ARR-B | ||||||||
Protein Properties | Length: 670aa MW: 73349.4 Da PI: 6.2738 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.3 | 8.1e-29 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl AUR62016155-RA 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 215 | 265 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ AUR62016155-RA 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP | |||||||
3 | Response_reg | 79.8 | 9.4e-27 | 37 | 145 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ + +l+++l+ +y ev+ a ++e al++l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + G AUR62016155-RA 37 VLVVDDDPTCLTILEKMLRTCRY-EVTKANKAEYALNMLRENKngFDVVISDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDSKQVVMKGVTHG 129 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + AUR62016155-RA 130 ACDYLIKPVRIEALKN 145 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 670 aa Download sequence |
MNLGGGLMGS MAMTSSTISR KSSEVVTADQ FPVGLRVLVV DDDPTCLTIL EKMLRTCRYE 60 VTKANKAEYA LNMLRENKNG FDVVISDVHM PDMDGFKLLE QVGLEMDLPV IMMSADDSKQ 120 VVMKGVTHGA CDYLIKPVRI EALKNIWQHV VRKKKYEYKD VEQSGSWDEG DRQLKHDDAV 180 SSPANDGSWK NSKRKSGEDD EADDKDDTTT LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGG LNSSFMPQDP TFSTMSSLGG 300 IDLQTLAATG QLSAQTLAAY TRLPPTIKPG ISMPFVDQRN LFSFENSKLR YGDGQQSQIS 360 NVSKQMNLLH GIPTTMEPKQ LAGLNQSAQT LGSMNMQANA SSSHQSSSLL MQQMVPQQRG 420 HISNESISSQ VPRIQPSVGQ PLQSNGNANA VLSRNGMPYD PVNQSASVVD FSVNHIPELP 480 GNSFPLGSTP GITSITSKGF NQEEISSDIK VSRGFVGSYD MFSEIHHKPQ EWQMQNPNMG 540 FAGSSQHVPS VQSGVNVAPS IMVNQSYVSG QKNEQNGHSI AGKPMYSTGL ENQHVGMQNV 600 NQNYNSIHAN NSSRVKAETF SDVVNPGANL FDYSSDDMLS TIMLKQQEGI GSSTGDFDFD 660 GYTLDNIPV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-171 | ARR-B family protein |