PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016128-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 198aa    MW: 22180.1 Da    PI: 4.4125
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016128-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-182069255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  AUR62016128-RA 20 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 69
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MVKKSPEYQP NDSSNINSIK YKGVRKRKWG KWVSEIRLPN SRERIWLGSY DTAEKAARAF  60
DAAQFCLRGK SANFNFPENP PDIAGGRSMT PSEIQVAASR FAYNSTNEDD RGGLEENPMI  120
EESGVEASFQ DQLSLSNALG SGNYVSDFGY LTGFDDFTGG DFFATQHQSN NNFDYVSQEA  180
ENTYDASLYQ DSYLWNF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12228KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-49ERF family protein