PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015984-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 425aa    MW: 48556.5 Da    PI: 4.7574
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015984-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.21.1e-07111156246
            FAR1   2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekk 46 
                      Y+++A  vGFsvrk+k++++  +++ itk+ fvCs  g r++  k
  AUR62015984-RA 111 LYCQHAAVVGFSVRKAKQTSKtGTKDIITKKFFVCSAAGLRNSVAK 156
                     79*************998877356667889999******9987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    
MENSSIHSLE FDINRNIQDT VEKFDINVIN FDLNDEAQIE SNYEGSLYHH PIQEDDAIED  60
VEQAIIEAED ENEVQQENQH VMQAQGENNN EEISGWLVGE TRATLAEIHE LYCQHAAVVG  120
FSVRKAKQTS KTGTKDIITK KFFVCSAAGL RNSVAKLNEE GQFEIVQHVL VHNHPLTRPQ  180
WNHFHRSERA MTEIKGQVIE AMQESGLRPM ESFNYMSNEA GGEDAIGHTV KDHMNYCYKL  240
KIKAIEAGDS QVVCDKLQEA YSEDPNFFFR VRLDADGRVC NLFWRDSMML EDYKIYGDVT  300
VFDTTYRTNR YNLICAPFVG INNHWKNTMF ACSFIGDETI ESFVWLFETF KKAMGGKCPV  360
SLFTDQDAAM AAAIPKVFPN TRHRLCLWNL IQNAVTRFGI LKSDDTFKAA FTKCLSGCIN  420
EAQFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-57FAR1 family protein