PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015871-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 252aa    MW: 27052 Da    PI: 7.2196
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015871-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16e-203988255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a+++a+++l+g
  AUR62015871-RA 39 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDKAARQLRG 88
                    89*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MRRGRSTAKT TQPQTQNGST PLDPPPAAIG INGSNSNVKF RGVRKRPWGR FAAEIRDPWK  60
KTRVWLGTFD SAEDAARAYD KAARQLRGPK AKTNFPPSSS NNHHQNDNVL NHPSPFYRND  120
AVLVDPYHHG TDGGGGCSDA EMIQRPASSG MSSTVESYSA SQAIRIRHAP PLKAHVVHAP  180
ATAEDCRSDC DSSSSVIDDV DGDIASSSAA VGFNSEVVLK QPLPFDLNLP PPEIDGCFLG  240
FEDFPTTALC L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-29ERF family protein