PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015815-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 431aa MW: 46626.6 Da PI: 5.1701

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015815-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95	5.4e-30	188	246	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ +Cpv+k+v+r+aed++++++tYeg+Hnh+ AUR62015815-RA 188 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGvSCPVRKQVQRCAEDNSILITTYEGHHNHN 246 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MDFFQGSTFS SKGALEESVT NKVDNNGGDI QDGFGDDDDH LKLQLDTGLK LQVARNFDFV 60 EKTTVGDEVE MLQSHDENQN AKDETLTNEG VIINDKRKQQ MGQFVGPKQE SLITDGDDRR 120 RSNSNSSDTN RDYEQLNRCR EREKQNTNNM QRVGGMAPTT VETEEAHEVT MRRARVSVRA 180 RSEANMISDG CQWRKYGQKM AKGNPCPRAY YRCTMGVSCP VRKQVQRCAE DNSILITTYE 240 GHHNHNLPPE AVPMASTTTS AASMLIAGSK SSSPMDGLLC PSIFSQPTAL PGLPSLATIS 300 ASAPFPTITL DLTRPQGSHP QGNNSNMSCA NANGPALMGL MQQLLGHGPN NEPNRENGNL 360 PLVDPLSIAK AALASDPNLA SALATAISSI IKGNYDSINN VNNNGNSSEI SMGKQSSKDN 420 NSELSNISEN *

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MDFFQGSTFS SKGALEESVT NKVDNNGGDI QDGFGDDDDH LKLQLDTGLK LQVARNFDFV  60
EKTTVGDEVE MLQSHDENQN AKDETLTNEG VIINDKRKQQ MGQFVGPKQE SLITDGDDRR  120
RSNSNSSDTN RDYEQLNRCR EREKQNTNNM QRVGGMAPTT VETEEAHEVT MRRARVSVRA  180
RSEANMISDG CQWRKYGQKM AKGNPCPRAY YRCTMGVSCP VRKQVQRCAE DNSILITTYE  240
GHHNHNLPPE AVPMASTTTS AASMLIAGSK SSSPMDGLLC PSIFSQPTAL PGLPSLATIS  300
ASAPFPTITL DLTRPQGSHP QGNNSNMSCA NANGPALMGL MQQLLGHGPN NEPNRENGNL  360
PLVDPLSIAK AALASDPNLA SALATAISSI IKGNYDSINN VNNNGNSSEI SMGKQSSKDN  420
NSELSNISEN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	3e-63	WRKY family protein