PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015689-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 363aa    MW: 39937.4 Da    PI: 8.233
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015689-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.15.5e-12162240688
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                     +p+++ ++g+ ++p + a++  +++      ++ ++  +sW++++   k+  +  l k Wk+F+ +n+Lk+gD+++F+l+++  
  AUR62015689-RA 162 SPASAVQHGQQTIPAEGARSLPNIE-A---PVILTRGTKSWTMNY-LGKNVVHKRLDKRWKQFAVDNKLKVGDVCTFELISKdP 240
                     577888899999******9997664.3...35567799*******.455555678***********************995423 PP

2B340.84e-13265357198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f  +lt+ +v+ + +l++p + a+   ++   ++  ++ ++  +sWe+++i ++   +  l + Wk+F+ +n+Lk+gD+++F+l++++  +l+v+
  AUR62015689-RA 265 FHIKLTKTHVSPQYQLTIPAEGARILPNI---EVP-VILTRGTESWEMNYIGNNIV-HKKLDGRWKQFAVDNKLKVGDVCTFELMSKDPMRLKVQ 354
                     66789999999***********9544433...222.3345677*******654444.4579************************9899999999 PP

                     EE- CS
              B3  96 vfr 98 
                     v+r
  AUR62015689-RA 355 VLR 357
                     987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MRSCVMARDL FCTHCHRQGH DMATCFQRPG YPEWGGREKG RGMGKVGVAS PARANNTGGQ  60
PASRPLQGAA VTTADGAALV GVTSAQIKQL LDYLNSIRQS KLPMSDDECS LENDESDVRG  120
VGFDDMGEGA AGHNAASLWH EDTPHNQVAG ESARHADQPT DSPASAVQHG QQTIPAEGAR  180
SLPNIEAPVI LTRGTKSWTM NYLGKNVVHK RLDKRWKQFA VDNKLKVGDV CTFELISKDP  240
MREMKPRVNT CEDIEIEPKT GAPFFHIKLT KTHVSPQYQL TIPAEGARIL PNIEVPVILT  300
RGTESWEMNY IGNNIVHKKL DGRWKQFAVD NKLKVGDVCT FELMSKDPMR LKVQVLRVLS  360
PH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1210217KRLDKRWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.15e-07B3 family protein