PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015455-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 289aa    MW: 33229.4 Da    PI: 8.8505
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015455-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.7e-0687108626
                     -SGGGGTS.--TTTTT-SS-SS CS
         zf-CCCH   6 CrffartG.tCkyGdrCkFaHg 26 
                     C++++++   C++G+ C +aHg
  AUR62015455-RA  87 CPDYRASNgNCPRGELCEYAHG 108
                     788888777************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MYRVDVENML REYSNAYNNR TRYPNPFADT DFEPDNFESD EFRMYSFKVK RCPLMRAHDW  60
TVCPYAHQGE RARRRDLKKV LYVAVSCPDY RASNGNCPRG ELCEYAHGVF EYWLHPTKYR  120
TRFCNAGNRC TRPICFFAHS LKQLRAEPMA HVPKWVRLAL RTQKLDLQAP PAEPSLSATN  180
AATHNSSTSG GREVGVIGRP RMSNTTPTPT SALWELQLPS SNINSRAPPT GRPQELKLEF  240
LETLRMLSIN DYYKVYNNNQ VVQNHNVDRE NVNSDGPRFD WVSDLLAG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07500.13e-51C3H family protein