PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62015350-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HB-other | ||||||||
Protein Properties | Length: 123aa MW: 13817.2 Da PI: 4.5728 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 15.3 | 3.4e-05 | 78 | 109 | 2 | 33 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeL 33 rk+ +++keq Lee F+++++++ ee e+ AUR62015350-RA 78 RKKLRLSKEQSAFLEESFKEHHTLNPEELSEM 109 788899*********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
MGSSRSTAEK EEEDDQREIN GGGSSSSSDP SRLQLDLLPL SPVPRSIQPP PPLRFPWLTD 60 NWATTSKGSD DEENGSTRKK LRLSKEQSAF LEESFKEHHT LNPEELSEMD RVLVLYRIIY 120 TN* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 83 | TRKKLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 1e-14 | HD-ZIP family protein |