PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015277-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 325aa    MW: 36033.4 Da    PI: 7.4553
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015277-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-174392255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa+a+++a+  l+g
  AUR62015277-RA 43 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAARAYDEAACLLRG 92
                    799******.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MEIQFQQDFI GQMGGKSVIP INKVTKLKGK SKKSSSSANR SNKFVGVRQR PSGRWVAEIK  60
DTTQKIRMWL GTFETAEAAA RAYDEAACLL RGSNTRTNFV VTHVSPNSPV ASRIKNLLKN  120
KKLESQKSSN VDDHQVDNTL VTPLTTNSVA FPSSTTNTAF SDPFNLASTN SSTAQFQDNF  180
GYKNLDNFVA QTQGLHQNRV YNGDVYRPQM NGFVGNYELV DYSTLFQCGN PGGCDINSSL  240
LKLPLSLSCQ NQSQETSEMP KNVALPQEMG VELFEMEKIK MEKDVSASYY NVSSNGLHEF  300
IDFVHDPIES LWDLPPLYSS FCSI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-25ERF family protein