PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015256-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 275aa    MW: 30443 Da    PI: 5.4098
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015256-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-1988137255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +g+W+AeIrdp++     r++lg+f ++e+Aa+a++ a+kk++g
  AUR62015256-RA  88 VYRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTFNSPEDAARAYDVAAKKIRG 137
                     69*******.**********954...4*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MCGGAIISDL IAAKRGRNLT THDLWSELDA DLLTSFPPKS NSSCSSQPAL TPQQGSPYAD  60
GVNAHQEDVN REERVANPSQ IRRTRKNVYR GIRRRPWGKW AAEIRDPRKG VRVWLGTFNS  120
PEDAARAYDV AAKKIRGDKA KLNFPDTPPP PPSPSLTAPL EIFLPAAKRQ CRSDFTESST  180
LSIESAQLSS ESTQMPVMSM GFYGDGVDHL TSEEGFVNRV NHNELSQQIL DLESLLGLDH  240
GAELAESDST SLPWVMDEFP MINGYDQFNY KFVF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18296RRTRKNVYRGIRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-51ERF family protein